Beyond Sequence-Only Models: Leveraging Structural Constraints for Antibiotic Resistance Prediction in Sparse Genomic Datasets

Published in ICLR 2025 MLGenX Workshop, 2025

Summary: Presents a structure-aware hybrid model that injects contact-map priors and residue-level constraints into sequence-based predictors to maintain interpretability with limited labeled isolates. Demonstrates improved accuracy across sparse genomic datasets for Mycobacterium tuberculosis.